Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Gm4780-202ENSMUST00000215200 2644 ntBASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc27Q3V036 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Gm13223-201ENSMUST00000118609 747 ntBASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Gm5425-201ENSMUST00000214125 459 ntBASIC16.93■□□□□ 0.3
Ccdc27Q3V036 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc27Q3V036 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Mir6956-201ENSMUST00000183598 62 ntBASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc27Q3V036 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Gm6912-201ENSMUST00000117218 544 ntBASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Gm24420-201ENSMUST00000176676 59 ntBASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Gm7775-201ENSMUST00000218871 853 ntBASIC16.91■□□□□ 0.3
Ccdc27Q3V036 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Gm9063-201ENSMUST00000223299 582 ntBASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 CT025624.1-201ENSMUST00000224007 2700 ntBASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.91■□□□□ 0.3
Ccdc27Q3V036 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms