Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Gm18018-201ENSMUST00000198273 408 ntBASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Gm19931-201ENSMUST00000198920 368 ntBASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.38■□□□□ 0.05
Cdkl5Q3UTQ8 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Itm2b-204ENSMUST00000228637 783 ntBASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdkl5Q3UTQ8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Gm6447-201ENSMUST00000118905 835 ntBASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.36■□□□□ 0.05
Cdkl5Q3UTQ8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms