Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.52□□□□□ -0.41
Brf2Q3UAW9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Mir7221-201ENSMUST00000184009 72 ntBASIC12.51□□□□□ -0.41
Brf2Q3UAW9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Brf2Q3UAW9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.5□□□□□ -0.41
Brf2Q3UAW9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Syt7-205ENSMUST00000224135 1557 ntBASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Brf2Q3UAW9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms