Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hddc2Q3SXD3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Gm27300-201ENSMUST00000184085 97 ntBASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Gm27335-201ENSMUST00000184758 97 ntBASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Hddc2Q3SXD3 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hddc2Q3SXD3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms