Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Q3KNL4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.06□□□□□ -0.32
Q3KNL4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Gm15240-201ENSMUST00000118156 720 ntBASIC13.06□□□□□ -0.32
Q3KNL4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.06□□□□□ -0.32
Q3KNL4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.06□□□□□ -0.32
Q3KNL4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Q3KNL4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Q3KNL4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.06□□□□□ -0.32
Q3KNL4 Gm7775-201ENSMUST00000218871 853 ntBASIC13.06□□□□□ -0.32
Q3KNL4 Gm9063-201ENSMUST00000223299 582 ntBASIC13.06□□□□□ -0.32
Q3KNL4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Q3KNL4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Q3KNL4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.06□□□□□ -0.32
Q3KNL4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.06□□□□□ -0.32
Q3KNL4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.06□□□□□ -0.32
Q3KNL4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.06□□□□□ -0.32
Q3KNL4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Q3KNL4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Q3KNL4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Q3KNL4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q3KNL4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.05□□□□□ -0.32
Q3KNL4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Q3KNL4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Q3KNL4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Q3KNL4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Q3KNL4 Gm13223-201ENSMUST00000118609 747 ntBASIC13.05□□□□□ -0.32
Q3KNL4 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.05□□□□□ -0.32
Q3KNL4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Q3KNL4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.05□□□□□ -0.32
Q3KNL4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.05□□□□□ -0.32
Q3KNL4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.05□□□□□ -0.32
Q3KNL4 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Q3KNL4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Q3KNL4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.05□□□□□ -0.32
Q3KNL4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.05□□□□□ -0.32
Q3KNL4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Q3KNL4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Q3KNL4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Q3KNL4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Q3KNL4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Q3KNL4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Q3KNL4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.04□□□□□ -0.32
Q3KNL4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Q3KNL4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Q3KNL4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Q3KNL4 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.04□□□□□ -0.32
Q3KNL4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Q3KNL4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Q3KNL4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Q3KNL4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Q3KNL4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.04□□□□□ -0.32
Q3KNL4 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.04□□□□□ -0.32
Q3KNL4 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.04□□□□□ -0.32
Q3KNL4 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms