Protein–RNA interactions for Protein: Q0VF76

Ttc39d, Tetratricopeptide repeat domain 39D, mousemouse

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39dQ0VF76 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ttc39dQ0VF76 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ttc39dQ0VF76 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ttc39dQ0VF76 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ttc39dQ0VF76 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Gm7488-201ENSMUST00000117148 684 ntBASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Gm27437-201ENSMUST00000183429 107 ntBASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ttc39dQ0VF76 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ttc39dQ0VF76 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Mir6977-201ENSMUST00000184960 64 ntBASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Gm37917-201ENSMUST00000194711 392 ntBASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Gm18624-201ENSMUST00000220966 658 ntBASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Itm2b-204ENSMUST00000228637 783 ntBASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ttc39dQ0VF76 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ttc39dQ0VF76 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms