Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Chd8Q09XV5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.77□□□□□ -0.53
Chd8Q09XV5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.77□□□□□ -0.53
Chd8Q09XV5 Gm5733-201ENSMUST00000190232 939 ntBASIC11.77□□□□□ -0.53
Chd8Q09XV5 Gm38007-201ENSMUST00000192187 313 ntBASIC11.77□□□□□ -0.53
Chd8Q09XV5 Gm19187-201ENSMUST00000206781 892 ntBASIC11.77□□□□□ -0.53
Chd8Q09XV5 Gm32025-201ENSMUST00000217960 307 ntBASIC11.77□□□□□ -0.53
Chd8Q09XV5 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.77□□□□□ -0.53
Chd8Q09XV5 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.77□□□□□ -0.53
Chd8Q09XV5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chd8Q09XV5 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.76□□□□□ -0.53
Chd8Q09XV5 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.76□□□□□ -0.53
Chd8Q09XV5 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.76□□□□□ -0.53
Chd8Q09XV5 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.76□□□□□ -0.53
Chd8Q09XV5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Gm7722-201ENSMUST00000120646 741 ntBASIC11.76□□□□□ -0.53
Chd8Q09XV5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Gm32999-201ENSMUST00000192693 562 ntBASIC11.76□□□□□ -0.53
Chd8Q09XV5 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.76□□□□□ -0.53
Chd8Q09XV5 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.76□□□□□ -0.53
Chd8Q09XV5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chd8Q09XV5 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Gm13624-201ENSMUST00000120263 462 ntBASIC11.75□□□□□ -0.53
Chd8Q09XV5 Gm24943-201ENSMUST00000158329 433 ntBASIC11.75□□□□□ -0.53
Chd8Q09XV5 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Gzmn-202ENSMUST00000225535 989 ntBASIC11.75□□□□□ -0.53
Chd8Q09XV5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.75□□□□□ -0.53
Chd8Q09XV5 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.75□□□□□ -0.53
Chd8Q09XV5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Gm11578-201ENSMUST00000118530 459 ntBASIC11.75□□□□□ -0.53
Chd8Q09XV5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Chd8Q09XV5 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.75□□□□□ -0.53
Chd8Q09XV5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Chd8Q09XV5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms