Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.58□□□□□ -0.4
Apoa1Q00623 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Apoa1Q00623 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.58□□□□□ -0.4
Apoa1Q00623 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Apoa1Q00623 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.58□□□□□ -0.4
Apoa1Q00623 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.58□□□□□ -0.4
Apoa1Q00623 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Apoa1Q00623 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Apoa1Q00623 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Apoa1Q00623 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Apoa1Q00623 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.57□□□□□ -0.4
Apoa1Q00623 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.57□□□□□ -0.4
Apoa1Q00623 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.57□□□□□ -0.4
Apoa1Q00623 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Mir7221-201ENSMUST00000184009 72 ntBASIC12.57□□□□□ -0.4
Apoa1Q00623 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.57□□□□□ -0.4
Apoa1Q00623 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.57□□□□□ -0.4
Apoa1Q00623 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.57□□□□□ -0.4
Apoa1Q00623 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.57□□□□□ -0.4
Apoa1Q00623 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Apoa1Q00623 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.57□□□□□ -0.4
Apoa1Q00623 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Apoa1Q00623 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Apoa1Q00623 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Apoa1Q00623 Mir449b-201ENSMUST00000104833 80 ntBASIC12.56□□□□□ -0.4
Apoa1Q00623 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.56□□□□□ -0.4
Apoa1Q00623 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.56□□□□□ -0.4
Apoa1Q00623 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.56□□□□□ -0.4
Apoa1Q00623 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Apoa1Q00623 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.56□□□□□ -0.4
Apoa1Q00623 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.56□□□□□ -0.4
Apoa1Q00623 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Apoa1Q00623 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Apoa1Q00623 Pck2-205ENSMUST00000226352 2784 ntBASIC12.56□□□□□ -0.4
Apoa1Q00623 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Apoa1Q00623 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Apoa1Q00623 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Apoa1Q00623 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Apoa1Q00623 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.55□□□□□ -0.4
Apoa1Q00623 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.55□□□□□ -0.4
Apoa1Q00623 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Apoa1Q00623 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Apoa1Q00623 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms