Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.03■□□□□ -0
GabpaQ00422 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
GabpaQ00422 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
GabpaQ00422 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
GabpaQ00422 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
GabpaQ00422 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
GabpaQ00422 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GabpaQ00422 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
GabpaQ00422 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
GabpaQ00422 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.02■□□□□ -0
GabpaQ00422 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GabpaQ00422 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GabpaQ00422 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GabpaQ00422 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GabpaQ00422 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
GabpaQ00422 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
GabpaQ00422 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
GabpaQ00422 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.02■□□□□ -0
GabpaQ00422 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.02■□□□□ -0
GabpaQ00422 Gm43758-201ENSMUST00000199500 367 ntBASIC15.02■□□□□ -0
GabpaQ00422 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.02■□□□□ -0
GabpaQ00422 Gm7783-201ENSMUST00000204795 781 ntBASIC15.02■□□□□ -0
GabpaQ00422 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.02■□□□□ -0
GabpaQ00422 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
GabpaQ00422 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GabpaQ00422 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GabpaQ00422 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GabpaQ00422 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
GabpaQ00422 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.02□□□□□ -0.01
GabpaQ00422 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.02□□□□□ -0.01
GabpaQ00422 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
GabpaQ00422 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.01□□□□□ -0.01
GabpaQ00422 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GabpaQ00422 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.01□□□□□ -0.01
GabpaQ00422 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
GabpaQ00422 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
GabpaQ00422 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
GabpaQ00422 Gm13342-201ENSMUST00000121055 207 ntBASIC15.01□□□□□ -0.01
GabpaQ00422 Gm26185-201ENSMUST00000157692 266 ntBASIC15.01□□□□□ -0.01
GabpaQ00422 Gm7584-201ENSMUST00000175829 940 ntBASIC15.01□□□□□ -0.01
GabpaQ00422 Cts7-204ENSMUST00000225321 1257 ntBASIC15.01□□□□□ -0.01
GabpaQ00422 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
GabpaQ00422 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.01□□□□□ -0.01
GabpaQ00422 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
GabpaQ00422 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
GabpaQ00422 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
GabpaQ00422 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
GabpaQ00422 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
GabpaQ00422 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
GabpaQ00422 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
GabpaQ00422 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
GabpaQ00422 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15□□□□□ -0.01
GabpaQ00422 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15□□□□□ -0.01
GabpaQ00422 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
GabpaQ00422 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
GabpaQ00422 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15□□□□□ -0.01
GabpaQ00422 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
GabpaQ00422 Gm21451-201ENSMUST00000111062 2775 ntBASIC15□□□□□ -0.01
GabpaQ00422 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms