Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn1bP97952 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Scn1bP97952 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.12□□□□□ -0.47
Scn1bP97952 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Scn1bP97952 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.12□□□□□ -0.47
Scn1bP97952 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Scn1bP97952 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Scn1bP97952 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.12□□□□□ -0.47
Scn1bP97952 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Scn1bP97952 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.12□□□□□ -0.47
Scn1bP97952 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.12□□□□□ -0.47
Scn1bP97952 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Scn1bP97952 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Scn1bP97952 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn1bP97952 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn1bP97952 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.11□□□□□ -0.47
Scn1bP97952 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Scn1bP97952 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Scn1bP97952 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Scn1bP97952 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn1bP97952 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.11□□□□□ -0.47
Scn1bP97952 Gm15427-201ENSMUST00000117288 531 ntBASIC12.11□□□□□ -0.47
Scn1bP97952 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.11□□□□□ -0.47
Scn1bP97952 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.11□□□□□ -0.47
Scn1bP97952 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn1bP97952 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.11□□□□□ -0.47
Scn1bP97952 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Rpph1-201ENSMUST00000175096 319 ntBASIC12.11□□□□□ -0.47
Scn1bP97952 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.11□□□□□ -0.47
Scn1bP97952 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.11□□□□□ -0.47
Scn1bP97952 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.11□□□□□ -0.47
Scn1bP97952 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Scn1bP97952 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Scn1bP97952 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Scn1bP97952 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn1bP97952 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Scn1bP97952 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn1bP97952 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Scn1bP97952 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Scn1bP97952 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Scn1bP97952 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn1bP97952 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Scn1bP97952 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.1□□□□□ -0.47
Scn1bP97952 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn1bP97952 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms