Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.98□□□□□ -0.65
Gfra1P97785 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Gfra1P97785 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.98□□□□□ -0.65
Gfra1P97785 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.98□□□□□ -0.65
Gfra1P97785 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Gfra1P97785 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.98□□□□□ -0.65
Gfra1P97785 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.98□□□□□ -0.65
Gfra1P97785 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.98□□□□□ -0.65
Gfra1P97785 Gm7561-201ENSMUST00000211203 886 ntBASIC10.98□□□□□ -0.65
Gfra1P97785 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Gfra1P97785 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Gm6091-201ENSMUST00000098307 165 ntBASIC10.98□□□□□ -0.65
Gfra1P97785 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.98□□□□□ -0.65
Gfra1P97785 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.98□□□□□ -0.65
Gfra1P97785 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Gfra1P97785 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gfra1P97785 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Gfra1P97785 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.97□□□□□ -0.65
Gfra1P97785 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Gfra1P97785 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Gfra1P97785 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.97□□□□□ -0.65
Gfra1P97785 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.97□□□□□ -0.65
Gfra1P97785 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Mir1982-201ENSMUST00000157368 74 ntBASIC10.97□□□□□ -0.65
Gfra1P97785 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Gfra1P97785 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.97□□□□□ -0.65
Gfra1P97785 Gm45784-201ENSMUST00000188360 142 ntBASIC10.97□□□□□ -0.65
Gfra1P97785 AY702102-202ENSMUST00000194651 1173 ntBASIC10.97□□□□□ -0.65
Gfra1P97785 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Gfra1P97785 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.97□□□□□ -0.65
Gfra1P97785 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.97□□□□□ -0.65
Gfra1P97785 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.97□□□□□ -0.65
Gfra1P97785 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.97□□□□□ -0.65
Gfra1P97785 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.97□□□□□ -0.65
Gfra1P97785 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.97□□□□□ -0.65
Gfra1P97785 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Gfra1P97785 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gfra1P97785 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms