Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Thumpd3P97770 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.53□□□□□ -0.24
Thumpd3P97770 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Thumpd3P97770 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Thumpd3P97770 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Thumpd3P97770 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Gm9522-201ENSMUST00000182394 926 ntBASIC13.53□□□□□ -0.24
Thumpd3P97770 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.53□□□□□ -0.24
Thumpd3P97770 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.53□□□□□ -0.24
Thumpd3P97770 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Thumpd3P97770 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Thumpd3P97770 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.53□□□□□ -0.24
Thumpd3P97770 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Thumpd3P97770 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd3P97770 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd3P97770 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd3P97770 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd3P97770 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd3P97770 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd3P97770 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Thumpd3P97770 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Thumpd3P97770 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.52□□□□□ -0.25
Thumpd3P97770 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.52□□□□□ -0.25
Thumpd3P97770 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.52□□□□□ -0.25
Thumpd3P97770 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.52□□□□□ -0.25
Thumpd3P97770 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.52□□□□□ -0.25
Thumpd3P97770 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Thumpd3P97770 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.52□□□□□ -0.25
Thumpd3P97770 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.52□□□□□ -0.25
Thumpd3P97770 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.52□□□□□ -0.25
Thumpd3P97770 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.52□□□□□ -0.25
Thumpd3P97770 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Thumpd3P97770 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Thumpd3P97770 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Thumpd3P97770 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.51□□□□□ -0.25
Thumpd3P97770 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms