Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 CT573086.4-201ENSMUST00000226729 342 ntBASIC8.77□□□□□ -1.01
PrkdcP97313 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC8.77□□□□□ -1.01
PrkdcP97313 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PrkdcP97313 Gm22711-201ENSMUST00000116890 133 ntBASIC8.77□□□□□ -1.01
PrkdcP97313 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC8.77□□□□□ -1.01
PrkdcP97313 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
PrkdcP97313 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
PrkdcP97313 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC8.77□□□□□ -1.01
PrkdcP97313 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
PrkdcP97313 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
PrkdcP97313 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
PrkdcP97313 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
PrkdcP97313 Gm11422-201ENSMUST00000118925 1103 ntBASIC8.76□□□□□ -1.01
PrkdcP97313 Gm14219-201ENSMUST00000120414 288 ntBASIC8.76□□□□□ -1.01
PrkdcP97313 Gm11836-201ENSMUST00000121022 441 ntBASIC8.76□□□□□ -1.01
PrkdcP97313 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
PrkdcP97313 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
PrkdcP97313 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC8.76□□□□□ -1.01
PrkdcP97313 Gm6198-201ENSMUST00000191337 2929 ntBASIC8.76□□□□□ -1.01
PrkdcP97313 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Gm23596-201ENSMUST00000104304 132 ntBASIC8.76□□□□□ -1.01
PrkdcP97313 Gm15725-201ENSMUST00000119947 1090 ntBASIC8.76□□□□□ -1.01
PrkdcP97313 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Gm16296-201ENSMUST00000159905 325 ntBASIC8.76□□□□□ -1.01
PrkdcP97313 Gm15744-201ENSMUST00000161734 213 ntBASIC8.76□□□□□ -1.01
PrkdcP97313 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
PrkdcP97313 Gm3332-201ENSMUST00000189337 928 ntBASIC8.76□□□□□ -1.01
PrkdcP97313 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC8.76□□□□□ -1.01
PrkdcP97313 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
PrkdcP97313 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC8.76□□□□□ -1.01
PrkdcP97313 Mir6941-201ENSMUST00000184711 59 ntBASIC8.76□□□□□ -1.01
PrkdcP97313 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
PrkdcP97313 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
PrkdcP97313 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC8.76□□□□□ -1.01
PrkdcP97313 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
PrkdcP97313 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC8.75□□□□□ -1.01
PrkdcP97313 Gm6855-201ENSMUST00000206307 790 ntBASIC8.75□□□□□ -1.01
PrkdcP97313 Gm18968-201ENSMUST00000221319 862 ntBASIC8.75□□□□□ -1.01
PrkdcP97313 Gm19009-201ENSMUST00000223072 823 ntBASIC8.75□□□□□ -1.01
PrkdcP97313 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC8.75□□□□□ -1.01
PrkdcP97313 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
PrkdcP97313 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC8.75□□□□□ -1.01
PrkdcP97313 Gm37305-201ENSMUST00000195714 4279 ntBASIC8.75□□□□□ -1.01
PrkdcP97313 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC8.75□□□□□ -1.01
PrkdcP97313 Gm14034-201ENSMUST00000120147 551 ntBASIC8.75□□□□□ -1.01
PrkdcP97313 Gm8737-201ENSMUST00000122208 642 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms