Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vgll3P85442 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vgll3P85442 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vgll3P85442 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vgll3P85442 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Vgll3P85442 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Vgll3P85442 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vgll3P85442 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Vgll3P85442 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vgll3P85442 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vgll3P85442 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vgll3P85442 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vgll3P85442 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vgll3P85442 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.59□□□□□ -0.23
Vgll3P85442 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Vgll3P85442 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Vgll3P85442 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Vgll3P85442 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vgll3P85442 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vgll3P85442 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.59□□□□□ -0.23
Vgll3P85442 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.59□□□□□ -0.23
Vgll3P85442 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vgll3P85442 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vgll3P85442 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.59□□□□□ -0.23
Vgll3P85442 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Gm9466-201ENSMUST00000218144 2246 ntBASIC13.59□□□□□ -0.23
Vgll3P85442 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vgll3P85442 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vgll3P85442 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Vgll3P85442 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Vgll3P85442 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vgll3P85442 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Vgll3P85442 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Vgll3P85442 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vgll3P85442 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.58□□□□□ -0.23
Vgll3P85442 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Vgll3P85442 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.58□□□□□ -0.24
Vgll3P85442 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Vgll3P85442 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.58□□□□□ -0.24
Vgll3P85442 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.58□□□□□ -0.24
Vgll3P85442 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vgll3P85442 Gm43143-201ENSMUST00000196083 2023 ntBASIC13.57□□□□□ -0.24
Vgll3P85442 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vgll3P85442 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.57□□□□□ -0.24
Vgll3P85442 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.57□□□□□ -0.24
Vgll3P85442 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.57□□□□□ -0.24
Vgll3P85442 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vgll3P85442 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Gm38910-201ENSMUST00000204630 2448 ntBASIC13.57□□□□□ -0.24
Vgll3P85442 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vgll3P85442 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.57□□□□□ -0.24
Vgll3P85442 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Vgll3P85442 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vgll3P85442 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.57□□□□□ -0.24
Vgll3P85442 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Vgll3P85442 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.57□□□□□ -0.24
Vgll3P85442 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms