Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SgcaP82350 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.13□□□□□ -0.63
SgcaP82350 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.13□□□□□ -0.63
SgcaP82350 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SgcaP82350 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.13□□□□□ -0.63
SgcaP82350 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.12□□□□□ -0.63
SgcaP82350 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SgcaP82350 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.12□□□□□ -0.63
SgcaP82350 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.12□□□□□ -0.63
SgcaP82350 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.12□□□□□ -0.63
SgcaP82350 Gm6222-201ENSMUST00000120787 396 ntBASIC11.12□□□□□ -0.63
SgcaP82350 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.12□□□□□ -0.63
SgcaP82350 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.12□□□□□ -0.63
SgcaP82350 Gm18737-201ENSMUST00000173594 937 ntBASIC11.12□□□□□ -0.63
SgcaP82350 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.12□□□□□ -0.63
SgcaP82350 Gm44492-201ENSMUST00000197012 141 ntBASIC11.12□□□□□ -0.63
SgcaP82350 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.12□□□□□ -0.63
SgcaP82350 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SgcaP82350 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.12□□□□□ -0.63
SgcaP82350 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.12□□□□□ -0.63
SgcaP82350 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.12□□□□□ -0.63
SgcaP82350 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SgcaP82350 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.12□□□□□ -0.63
SgcaP82350 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.12□□□□□ -0.63
SgcaP82350 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
SgcaP82350 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.12□□□□□ -0.63
SgcaP82350 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SgcaP82350 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SgcaP82350 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SgcaP82350 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SgcaP82350 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcaP82350 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcaP82350 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SgcaP82350 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.11□□□□□ -0.63
SgcaP82350 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcaP82350 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.11□□□□□ -0.63
SgcaP82350 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.11□□□□□ -0.63
SgcaP82350 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcaP82350 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.11□□□□□ -0.63
SgcaP82350 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.11□□□□□ -0.63
SgcaP82350 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SgcaP82350 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SgcaP82350 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.11□□□□□ -0.63
SgcaP82350 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms