Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.44□□□□□ -0.42
Six5P70178 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Six5P70178 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.43□□□□□ -0.42
Six5P70178 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Six5P70178 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Six5P70178 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Six5P70178 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.43□□□□□ -0.42
Six5P70178 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Six5P70178 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Six5P70178 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Six5P70178 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.43□□□□□ -0.42
Six5P70178 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Gm12091-201ENSMUST00000146791 830 ntBASIC12.43□□□□□ -0.42
Six5P70178 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.43□□□□□ -0.42
Six5P70178 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.43□□□□□ -0.42
Six5P70178 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Gm8463-201ENSMUST00000208573 613 ntBASIC12.43□□□□□ -0.42
Six5P70178 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.43□□□□□ -0.42
Six5P70178 Itm2b-204ENSMUST00000228637 783 ntBASIC12.43□□□□□ -0.42
Six5P70178 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Six5P70178 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Six5P70178 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Six5P70178 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Six5P70178 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Six5P70178 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Six5P70178 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.42□□□□□ -0.42
Six5P70178 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.42□□□□□ -0.42
Six5P70178 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.42□□□□□ -0.42
Six5P70178 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.42□□□□□ -0.42
Six5P70178 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.42□□□□□ -0.42
Six5P70178 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.42□□□□□ -0.42
Six5P70178 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.42□□□□□ -0.42
Six5P70178 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Six5P70178 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Six5P70178 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.42□□□□□ -0.42
Six5P70178 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Six5P70178 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms