Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.58□□□□□ -0.24
Ybx1P62960 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Gm24255-201ENSMUST00000104481 128 ntBASIC13.58□□□□□ -0.24
Ybx1P62960 Mir877-201ENSMUST00000104738 85 ntBASIC13.58□□□□□ -0.24
Ybx1P62960 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.58□□□□□ -0.24
Ybx1P62960 Gm3890-201ENSMUST00000182416 207 ntBASIC13.58□□□□□ -0.24
Ybx1P62960 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.58□□□□□ -0.24
Ybx1P62960 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ybx1P62960 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.58□□□□□ -0.24
Ybx1P62960 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Ybx1P62960 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ybx1P62960 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.58□□□□□ -0.24
Ybx1P62960 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.58□□□□□ -0.24
Ybx1P62960 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ybx1P62960 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.58□□□□□ -0.24
Ybx1P62960 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Ybx1P62960 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ybx1P62960 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ybx1P62960 Gm13297-201ENSMUST00000120205 934 ntBASIC13.57□□□□□ -0.24
Ybx1P62960 Gm17376-201ENSMUST00000166016 84 ntBASIC13.57□□□□□ -0.24
Ybx1P62960 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Gm29199-201ENSMUST00000187766 775 ntBASIC13.57□□□□□ -0.24
Ybx1P62960 Gm37466-201ENSMUST00000195692 652 ntBASIC13.57□□□□□ -0.24
Ybx1P62960 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ybx1P62960 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.57□□□□□ -0.24
Ybx1P62960 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ybx1P62960 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ybx1P62960 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ybx1P62960 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ybx1P62960 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ybx1P62960 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ybx1P62960 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Ybx1P62960 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ybx1P62960 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Ybx1P62960 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.56□□□□□ -0.24
Ybx1P62960 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.56□□□□□ -0.24
Ybx1P62960 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Ybx1P62960 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.56□□□□□ -0.24
Ybx1P62960 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ybx1P62960 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.56□□□□□ -0.24
Ybx1P62960 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ybx1P62960 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms