Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.72□□□□□ -0.53
Sec61a1P61620 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a1P61620 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a1P61620 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Sec61a1P61620 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.72□□□□□ -0.53
Sec61a1P61620 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sec61a1P61620 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a1P61620 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a1P61620 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a1P61620 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Sec61a1P61620 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.72□□□□□ -0.53
Sec61a1P61620 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.72□□□□□ -0.53
Sec61a1P61620 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sec61a1P61620 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Gm15321-201ENSMUST00000121290 288 ntBASIC11.71□□□□□ -0.53
Sec61a1P61620 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.71□□□□□ -0.53
Sec61a1P61620 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.71□□□□□ -0.53
Sec61a1P61620 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sec61a1P61620 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sec61a1P61620 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a1P61620 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a1P61620 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a1P61620 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a1P61620 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.71□□□□□ -0.54
Sec61a1P61620 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a1P61620 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a1P61620 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Sec61a1P61620 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a1P61620 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a1P61620 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a1P61620 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
Sec61a1P61620 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sec61a1P61620 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.7□□□□□ -0.54
Sec61a1P61620 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sec61a1P61620 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.7□□□□□ -0.54
Sec61a1P61620 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.7□□□□□ -0.54
Sec61a1P61620 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.7□□□□□ -0.54
Sec61a1P61620 Gm2445-201ENSMUST00000182798 989 ntBASIC11.7□□□□□ -0.54
Sec61a1P61620 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sec61a1P61620 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.7□□□□□ -0.54
Sec61a1P61620 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.7□□□□□ -0.54
Sec61a1P61620 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sec61a1P61620 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms