Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.8□□□□□ -0.52
Sf3b6P59708 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.8□□□□□ -0.52
Sf3b6P59708 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.8□□□□□ -0.52
Sf3b6P59708 Gm25948-201ENSMUST00000175334 112 ntBASIC11.8□□□□□ -0.52
Sf3b6P59708 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.8□□□□□ -0.52
Sf3b6P59708 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.8□□□□□ -0.52
Sf3b6P59708 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.8□□□□□ -0.52
Sf3b6P59708 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Sf3b6P59708 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.8□□□□□ -0.52
Sf3b6P59708 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sf3b6P59708 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Sf3b6P59708 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.8□□□□□ -0.52
Sf3b6P59708 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sf3b6P59708 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sf3b6P59708 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.79□□□□□ -0.52
Sf3b6P59708 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Sf3b6P59708 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.79□□□□□ -0.52
Sf3b6P59708 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sf3b6P59708 Gm15770-201ENSMUST00000117498 584 ntBASIC11.79□□□□□ -0.52
Sf3b6P59708 Gm15460-201ENSMUST00000118147 391 ntBASIC11.79□□□□□ -0.52
Sf3b6P59708 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Sf3b6P59708 Gm22175-201ENSMUST00000175007 78 ntBASIC11.79□□□□□ -0.52
Sf3b6P59708 Mir6956-201ENSMUST00000183598 62 ntBASIC11.79□□□□□ -0.52
Sf3b6P59708 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.79□□□□□ -0.52
Sf3b6P59708 Gm5779-201ENSMUST00000218467 910 ntBASIC11.79□□□□□ -0.52
Sf3b6P59708 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Sf3b6P59708 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sf3b6P59708 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Sf3b6P59708 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sf3b6P59708 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sf3b6P59708 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.78□□□□□ -0.52
Sf3b6P59708 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Sf3b6P59708 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.78□□□□□ -0.52
Sf3b6P59708 Gm6912-201ENSMUST00000117218 544 ntBASIC11.78□□□□□ -0.52
Sf3b6P59708 Gm8410-201ENSMUST00000117225 605 ntBASIC11.78□□□□□ -0.52
Sf3b6P59708 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Sf3b6P59708 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.78□□□□□ -0.52
Sf3b6P59708 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.78□□□□□ -0.52
Sf3b6P59708 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.78□□□□□ -0.52
Sf3b6P59708 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sf3b6P59708 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sf3b6P59708 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms