Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CckbrP56481 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CckbrP56481 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Mir874-201ENSMUST00000104769 76 ntBASIC12.31□□□□□ -0.44
CckbrP56481 Gm12490-201ENSMUST00000120255 560 ntBASIC12.31□□□□□ -0.44
CckbrP56481 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CckbrP56481 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.31□□□□□ -0.44
CckbrP56481 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Gm18473-201ENSMUST00000220543 868 ntBASIC12.31□□□□□ -0.44
CckbrP56481 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.31□□□□□ -0.44
CckbrP56481 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.31□□□□□ -0.44
CckbrP56481 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.31□□□□□ -0.44
CckbrP56481 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.31□□□□□ -0.44
CckbrP56481 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.31□□□□□ -0.44
CckbrP56481 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.31□□□□□ -0.44
CckbrP56481 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CckbrP56481 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.3□□□□□ -0.44
CckbrP56481 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CckbrP56481 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.3□□□□□ -0.44
CckbrP56481 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.3□□□□□ -0.44
CckbrP56481 Gm12928-201ENSMUST00000117115 573 ntBASIC12.3□□□□□ -0.44
CckbrP56481 Gm5687-201ENSMUST00000118252 640 ntBASIC12.3□□□□□ -0.44
CckbrP56481 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.3□□□□□ -0.44
CckbrP56481 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.3□□□□□ -0.44
CckbrP56481 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.3□□□□□ -0.44
CckbrP56481 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.3□□□□□ -0.44
CckbrP56481 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.3□□□□□ -0.44
CckbrP56481 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.3□□□□□ -0.44
CckbrP56481 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.3□□□□□ -0.44
CckbrP56481 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.3□□□□□ -0.44
CckbrP56481 Gm8463-201ENSMUST00000208573 613 ntBASIC12.3□□□□□ -0.44
CckbrP56481 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.3□□□□□ -0.44
CckbrP56481 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.3□□□□□ -0.44
CckbrP56481 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CckbrP56481 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.3□□□□□ -0.44
CckbrP56481 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.3□□□□□ -0.44
CckbrP56481 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.3□□□□□ -0.44
CckbrP56481 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CckbrP56481 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CckbrP56481 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.29□□□□□ -0.44
CckbrP56481 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CckbrP56481 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CckbrP56481 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CckbrP56481 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CckbrP56481 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CckbrP56481 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.29□□□□□ -0.44
CckbrP56481 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CckbrP56481 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.29□□□□□ -0.44
CckbrP56481 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
CckbrP56481 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.29□□□□□ -0.44
CckbrP56481 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CckbrP56481 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CckbrP56481 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CckbrP56481 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CckbrP56481 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.29□□□□□ -0.44
CckbrP56481 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms