Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nub1P54729 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Nub1P54729 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Gm15371-201ENSMUST00000117057 784 ntBASIC14.31□□□□□ -0.12
Nub1P54729 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Nub1P54729 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.31□□□□□ -0.12
Nub1P54729 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Gm44397-201ENSMUST00000195950 113 ntBASIC14.31□□□□□ -0.12
Nub1P54729 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.31□□□□□ -0.12
Nub1P54729 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.31□□□□□ -0.12
Nub1P54729 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.31□□□□□ -0.12
Nub1P54729 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.31□□□□□ -0.12
Nub1P54729 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.31□□□□□ -0.12
Nub1P54729 Gm26315-201ENSMUST00000083890 321 ntBASIC14.31□□□□□ -0.12
Nub1P54729 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nub1P54729 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.31□□□□□ -0.12
Nub1P54729 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nub1P54729 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nub1P54729 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.31□□□□□ -0.12
Nub1P54729 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.31□□□□□ -0.12
Nub1P54729 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.31□□□□□ -0.12
Nub1P54729 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nub1P54729 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nub1P54729 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nub1P54729 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.3□□□□□ -0.12
Nub1P54729 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Grk6-205ENSMUST00000224653 2976 ntBASIC14.3□□□□□ -0.12
Nub1P54729 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.3□□□□□ -0.12
Nub1P54729 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.3□□□□□ -0.12
Nub1P54729 Gm11918-201ENSMUST00000121660 179 ntBASIC14.3□□□□□ -0.12
Nub1P54729 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.3□□□□□ -0.12
Nub1P54729 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.3□□□□□ -0.12
Nub1P54729 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.3□□□□□ -0.12
Nub1P54729 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.3□□□□□ -0.12
Nub1P54729 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.3□□□□□ -0.12
Nub1P54729 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.3□□□□□ -0.12
Nub1P54729 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nub1P54729 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Nub1P54729 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nub1P54729 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nub1P54729 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nub1P54729 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms