Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.51□□□□□ -0.25
Sox1P53783 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.51□□□□□ -0.25
Sox1P53783 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.51□□□□□ -0.25
Sox1P53783 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox1P53783 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Sox1P53783 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Sox1P53783 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sox1P53783 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.5□□□□□ -0.25
Sox1P53783 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sox1P53783 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Gm6447-201ENSMUST00000118905 835 ntBASIC13.5□□□□□ -0.25
Sox1P53783 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.5□□□□□ -0.25
Sox1P53783 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Gm8492-201ENSMUST00000182375 987 ntBASIC13.5□□□□□ -0.25
Sox1P53783 Gm42779-201ENSMUST00000198807 406 ntBASIC13.5□□□□□ -0.25
Sox1P53783 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sox1P53783 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sox1P53783 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.5□□□□□ -0.25
Sox1P53783 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sox1P53783 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox1P53783 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Sox1P53783 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox1P53783 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.49□□□□□ -0.25
Sox1P53783 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.49□□□□□ -0.25
Sox1P53783 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Sox1P53783 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Sox1P53783 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sox1P53783 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.49□□□□□ -0.25
Sox1P53783 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.49□□□□□ -0.25
Sox1P53783 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Sox1P53783 Gm28693-202ENSMUST00000190758 331 ntBASIC13.49□□□□□ -0.25
Sox1P53783 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.49□□□□□ -0.25
Sox1P53783 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sox1P53783 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox1P53783 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.49□□□□□ -0.25
Sox1P53783 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.49□□□□□ -0.25
Sox1P53783 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sox1P53783 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox1P53783 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sox1P53783 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Sox1P53783 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.48□□□□□ -0.25
Sox1P53783 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sox1P53783 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sox1P53783 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Sox1P53783 Gm13296-201ENSMUST00000117854 997 ntBASIC13.48□□□□□ -0.25
Sox1P53783 Gm25545-201ENSMUST00000122673 323 ntBASIC13.48□□□□□ -0.25
Sox1P53783 Gm17208-201ENSMUST00000168388 535 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms