Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11□□□□□ -0.65
Nkx2-1P50220 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11□□□□□ -0.65
Nkx2-1P50220 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Nkx2-1P50220 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Nkx2-1P50220 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-1P50220 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Gm45667-201ENSMUST00000210380 1316 ntBASIC11□□□□□ -0.65
Nkx2-1P50220 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Gm13332-201ENSMUST00000120451 1398 ntBASIC11□□□□□ -0.65
Nkx2-1P50220 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11□□□□□ -0.65
Nkx2-1P50220 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11□□□□□ -0.65
Nkx2-1P50220 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nkx2-1P50220 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nkx2-1P50220 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Gm11594-201ENSMUST00000122313 162 ntBASIC10.99□□□□□ -0.65
Nkx2-1P50220 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.99□□□□□ -0.65
Nkx2-1P50220 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.99□□□□□ -0.65
Nkx2-1P50220 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.99□□□□□ -0.65
Nkx2-1P50220 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.99□□□□□ -0.65
Nkx2-1P50220 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.99□□□□□ -0.65
Nkx2-1P50220 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.99□□□□□ -0.65
Nkx2-1P50220 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.98□□□□□ -0.65
Nkx2-1P50220 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gm13365-201ENSMUST00000121188 973 ntBASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gm9824-201ENSMUST00000178707 561 ntBASIC10.98□□□□□ -0.65
Nkx2-1P50220 Mir6990-201ENSMUST00000183724 91 ntBASIC10.98□□□□□ -0.65
Nkx2-1P50220 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gm18049-201ENSMUST00000208909 581 ntBASIC10.98□□□□□ -0.65
Nkx2-1P50220 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nkx2-1P50220 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms