Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rfx3P48381 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rfx3P48381 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rfx3P48381 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rfx3P48381 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rfx3P48381 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.01□□□□□ -0.49
Rfx3P48381 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.01□□□□□ -0.49
Rfx3P48381 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.01□□□□□ -0.49
Rfx3P48381 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.01□□□□□ -0.49
Rfx3P48381 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.01□□□□□ -0.49
Rfx3P48381 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.01□□□□□ -0.49
Rfx3P48381 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Rfx3P48381 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.01□□□□□ -0.49
Rfx3P48381 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rfx3P48381 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.01□□□□□ -0.49
Rfx3P48381 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rfx3P48381 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rfx3P48381 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfx3P48381 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rfx3P48381 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rfx3P48381 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12□□□□□ -0.49
Rfx3P48381 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12□□□□□ -0.49
Rfx3P48381 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12□□□□□ -0.49
Rfx3P48381 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rfx3P48381 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rfx3P48381 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rfx3P48381 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rfx3P48381 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rfx3P48381 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rfx3P48381 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfx3P48381 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rfx3P48381 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rfx3P48381 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfx3P48381 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Gm15770-201ENSMUST00000117498 584 ntBASIC11.99□□□□□ -0.49
Rfx3P48381 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfx3P48381 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.99□□□□□ -0.49
Rfx3P48381 Gm27772-201ENSMUST00000184900 187 ntBASIC11.99□□□□□ -0.49
Rfx3P48381 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.99□□□□□ -0.49
Rfx3P48381 Gm17795-201ENSMUST00000214505 757 ntBASIC11.99□□□□□ -0.49
Rfx3P48381 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfx3P48381 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms