Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
TgfaP48030 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TgfaP48030 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TgfaP48030 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TgfaP48030 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TgfaP48030 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TgfaP48030 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TgfaP48030 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.5□□□□□ -0.57
TgfaP48030 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TgfaP48030 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TgfaP48030 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Gm12502-201ENSMUST00000120197 444 ntBASIC11.5□□□□□ -0.57
TgfaP48030 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.5□□□□□ -0.57
TgfaP48030 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.5□□□□□ -0.57
TgfaP48030 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.5□□□□□ -0.57
TgfaP48030 Gm28693-202ENSMUST00000190758 331 ntBASIC11.5□□□□□ -0.57
TgfaP48030 Gm6458-201ENSMUST00000211573 635 ntBASIC11.5□□□□□ -0.57
TgfaP48030 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
TgfaP48030 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TgfaP48030 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.5□□□□□ -0.57
TgfaP48030 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TgfaP48030 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TgfaP48030 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.5□□□□□ -0.57
TgfaP48030 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TgfaP48030 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.49□□□□□ -0.57
TgfaP48030 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
TgfaP48030 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.49□□□□□ -0.57
TgfaP48030 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
TgfaP48030 Gm14277-201ENSMUST00000121195 360 ntBASIC11.49□□□□□ -0.57
TgfaP48030 Gm12176-201ENSMUST00000121420 875 ntBASIC11.49□□□□□ -0.57
TgfaP48030 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.49□□□□□ -0.57
TgfaP48030 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Gm17208-201ENSMUST00000168388 535 ntBASIC11.49□□□□□ -0.57
TgfaP48030 Mir6979-201ENSMUST00000183927 56 ntBASIC11.49□□□□□ -0.57
TgfaP48030 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.49□□□□□ -0.57
TgfaP48030 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.49□□□□□ -0.57
TgfaP48030 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TgfaP48030 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.48□□□□□ -0.57
TgfaP48030 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.48□□□□□ -0.57
TgfaP48030 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TgfaP48030 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TgfaP48030 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TgfaP48030 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TgfaP48030 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
TgfaP48030 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
TgfaP48030 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
TgfaP48030 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
TgfaP48030 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
TgfaP48030 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms