Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx1-2P42580 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx1-2P42580 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx1-2P42580 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx1-2P42580 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx1-2P42580 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx1-2P42580 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx1-2P42580 Gm37105-201ENSMUST00000192251 2085 ntBASIC16.33■□□□□ 0.21
Nkx1-2P42580 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC16.33■□□□□ 0.21
Nkx1-2P42580 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Gm5422-201ENSMUST00000050717 2721 ntBASIC16.33■□□□□ 0.2
Nkx1-2P42580 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Nupl1-206ENSMUST00000225111 2936 ntBASIC16.33■□□□□ 0.2
Nkx1-2P42580 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx1-2P42580 Gm43677-201ENSMUST00000198098 2378 ntBASIC16.33■□□□□ 0.2
Nkx1-2P42580 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Nkx1-2P42580 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.32■□□□□ 0.2
Nkx1-2P42580 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.32■□□□□ 0.2
Nkx1-2P42580 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Gm24447-201ENSMUST00000083977 338 ntBASIC16.32■□□□□ 0.2
Nkx1-2P42580 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC16.32■□□□□ 0.2
Nkx1-2P42580 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.31■□□□□ 0.2
Nkx1-2P42580 Gm27838-201ENSMUST00000184829 128 ntBASIC16.31■□□□□ 0.2
Nkx1-2P42580 Gm43094-201ENSMUST00000196549 921 ntBASIC16.31■□□□□ 0.2
Nkx1-2P42580 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.31■□□□□ 0.2
Nkx1-2P42580 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.31■□□□□ 0.2
Nkx1-2P42580 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Gm20445-201ENSMUST00000061905 565 ntBASIC16.31■□□□□ 0.2
Nkx1-2P42580 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.31■□□□□ 0.2
Nkx1-2P42580 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nkx1-2P42580 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms