Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Gm8584-201ENSMUST00000171982 758 ntBASIC10.91□□□□□ -0.66
Timp3P39876 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Timp3P39876 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.91□□□□□ -0.66
Timp3P39876 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.91□□□□□ -0.66
Timp3P39876 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Timp3P39876 Gm24447-201ENSMUST00000083977 338 ntBASIC10.91□□□□□ -0.66
Timp3P39876 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Timp3P39876 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Timp3P39876 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Timp3P39876 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.9□□□□□ -0.66
Timp3P39876 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Timp3P39876 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.9□□□□□ -0.66
Timp3P39876 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.9□□□□□ -0.66
Timp3P39876 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.9□□□□□ -0.66
Timp3P39876 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Gm27839-201ENSMUST00000184242 106 ntBASIC10.9□□□□□ -0.66
Timp3P39876 AY702102-202ENSMUST00000194651 1173 ntBASIC10.9□□□□□ -0.66
Timp3P39876 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Timp3P39876 Gm5161-201ENSMUST00000075243 853 ntBASIC10.9□□□□□ -0.66
Timp3P39876 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Timp3P39876 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Timp3P39876 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.9□□□□□ -0.66
Timp3P39876 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.9□□□□□ -0.66
Timp3P39876 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.9□□□□□ -0.66
Timp3P39876 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Timp3P39876 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Timp3P39876 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Timp3P39876 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Timp3P39876 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Timp3P39876 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Timp3P39876 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.9□□□□□ -0.67
Timp3P39876 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Timp3P39876 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Timp3P39876 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Timp3P39876 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.89□□□□□ -0.67
Timp3P39876 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Timp3P39876 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Timp3P39876 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Timp3P39876 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Timp3P39876 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Timp3P39876 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.89□□□□□ -0.67
Timp3P39876 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms