Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.37□□□□□ -0.27
Fen1P39749 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.37□□□□□ -0.27
Fen1P39749 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.37□□□□□ -0.27
Fen1P39749 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.37□□□□□ -0.27
Fen1P39749 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Fen1P39749 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Fen1P39749 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Fen1P39749 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Fen1P39749 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.37□□□□□ -0.27
Fen1P39749 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fen1P39749 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.36□□□□□ -0.27
Fen1P39749 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.36□□□□□ -0.27
Fen1P39749 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Fen1P39749 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Fen1P39749 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.36□□□□□ -0.27
Fen1P39749 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Fen1P39749 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.36□□□□□ -0.27
Fen1P39749 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Fen1P39749 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Fen1P39749 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Pck2-205ENSMUST00000226352 2784 ntBASIC13.36□□□□□ -0.27
Fen1P39749 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fen1P39749 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Fen1P39749 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.35□□□□□ -0.27
Fen1P39749 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.35□□□□□ -0.27
Fen1P39749 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Fen1P39749 Gm33320-201ENSMUST00000192232 530 ntBASIC13.35□□□□□ -0.27
Fen1P39749 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.35□□□□□ -0.27
Fen1P39749 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.35□□□□□ -0.27
Fen1P39749 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Fen1P39749 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Fen1P39749 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.35□□□□□ -0.27
Fen1P39749 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.35□□□□□ -0.27
Fen1P39749 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fen1P39749 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fen1P39749 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms