Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.09□□□□□ -0.31
HmgclP38060 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HmgclP38060 Gm11918-201ENSMUST00000121660 179 ntBASIC13.09□□□□□ -0.31
HmgclP38060 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.09□□□□□ -0.31
HmgclP38060 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.09□□□□□ -0.31
HmgclP38060 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HmgclP38060 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.09□□□□□ -0.31
HmgclP38060 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.09□□□□□ -0.31
HmgclP38060 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.09□□□□□ -0.31
HmgclP38060 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.09□□□□□ -0.31
HmgclP38060 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HmgclP38060 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HmgclP38060 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
HmgclP38060 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
HmgclP38060 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.08□□□□□ -0.32
HmgclP38060 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HmgclP38060 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.08□□□□□ -0.32
HmgclP38060 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.08□□□□□ -0.32
HmgclP38060 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.08□□□□□ -0.32
HmgclP38060 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.08□□□□□ -0.32
HmgclP38060 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.08□□□□□ -0.32
HmgclP38060 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HmgclP38060 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.08□□□□□ -0.32
HmgclP38060 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HmgclP38060 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HmgclP38060 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.07□□□□□ -0.32
HmgclP38060 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
HmgclP38060 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.07□□□□□ -0.32
HmgclP38060 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.07□□□□□ -0.32
HmgclP38060 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.07□□□□□ -0.32
HmgclP38060 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Gm14350-201ENSMUST00000116642 640 ntBASIC13.07□□□□□ -0.32
HmgclP38060 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.07□□□□□ -0.32
HmgclP38060 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HmgclP38060 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.07□□□□□ -0.32
HmgclP38060 Gm7287-201ENSMUST00000205267 602 ntBASIC13.07□□□□□ -0.32
HmgclP38060 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.07□□□□□ -0.32
HmgclP38060 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.07□□□□□ -0.32
HmgclP38060 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
HmgclP38060 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HmgclP38060 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
HmgclP38060 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.07□□□□□ -0.32
HmgclP38060 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HmgclP38060 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HmgclP38060 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.06□□□□□ -0.32
HmgclP38060 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HmgclP38060 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.06□□□□□ -0.32
HmgclP38060 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.06□□□□□ -0.32
HmgclP38060 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HmgclP38060 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 128.4 ms