Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Rfc1P35601 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.98□□□□□ -0.17
Rfc1P35601 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.98□□□□□ -0.17
Rfc1P35601 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.98□□□□□ -0.17
Rfc1P35601 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rfc1P35601 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rfc1P35601 Gm29310-201ENSMUST00000185468 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21825-201ENSMUST00000185728 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm29109-201ENSMUST00000185895 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21896-201ENSMUST00000186520 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21873-201ENSMUST00000186728 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21794-201ENSMUST00000187056 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21880-201ENSMUST00000187275 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21826-201ENSMUST00000187451 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21198-201ENSMUST00000188393 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21749-201ENSMUST00000189343 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21901-201ENSMUST00000189568 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm29424-201ENSMUST00000189716 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm28599-201ENSMUST00000189838 694 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21867-201ENSMUST00000189917 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm29269-201ENSMUST00000190087 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21722-201ENSMUST00000190153 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm28423-201ENSMUST00000190701 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21899-201ENSMUST00000190745 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21910-201ENSMUST00000191163 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21849-201ENSMUST00000191571 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm28678-201ENSMUST00000191593 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm20910-201ENSMUST00000193268 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm21871-201ENSMUST00000194621 696 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.98□□□□□ -0.17
Rfc1P35601 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rfc1P35601 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rfc1P35601 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.98□□□□□ -0.17
Rfc1P35601 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rfc1P35601 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.97□□□□□ -0.17
Rfc1P35601 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rfc1P35601 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.97□□□□□ -0.17
Rfc1P35601 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.97□□□□□ -0.17
Rfc1P35601 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.97□□□□□ -0.17
Rfc1P35601 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.97□□□□□ -0.17
Rfc1P35601 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.97□□□□□ -0.17
Rfc1P35601 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rfc1P35601 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.97□□□□□ -0.17
Rfc1P35601 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Rfc1P35601 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rfc1P35601 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rfc1P35601 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rfc1P35601 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Rfc1P35601 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rfc1P35601 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms