Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a11P31650 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a11P31650 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Gm15678-201ENSMUST00000117573 960 ntBASIC12.63□□□□□ -0.39
Slc6a11P31650 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.63□□□□□ -0.39
Slc6a11P31650 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Gm9522-201ENSMUST00000182394 926 ntBASIC12.63□□□□□ -0.39
Slc6a11P31650 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.63□□□□□ -0.39
Slc6a11P31650 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.63□□□□□ -0.39
Slc6a11P31650 Gm6007-201ENSMUST00000208170 823 ntBASIC12.63□□□□□ -0.39
Slc6a11P31650 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.63□□□□□ -0.39
Slc6a11P31650 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Slc6a11P31650 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a11P31650 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.63□□□□□ -0.39
Slc6a11P31650 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a11P31650 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a11P31650 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.62□□□□□ -0.39
Slc6a11P31650 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc6a11P31650 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc6a11P31650 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a11P31650 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a11P31650 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Gm15806-201ENSMUST00000120696 955 ntBASIC12.62□□□□□ -0.39
Slc6a11P31650 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.62□□□□□ -0.39
Slc6a11P31650 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc6a11P31650 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a11P31650 Gm28760-201ENSMUST00000185995 736 ntBASIC12.62□□□□□ -0.39
Slc6a11P31650 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.62□□□□□ -0.39
Slc6a11P31650 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a11P31650 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a11P31650 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a11P31650 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a11P31650 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.61□□□□□ -0.39
Slc6a11P31650 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a11P31650 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a11P31650 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Slc6a11P31650 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a11P31650 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a11P31650 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a11P31650 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a11P31650 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a11P31650 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Slc6a11P31650 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.61□□□□□ -0.39
Slc6a11P31650 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Slc6a11P31650 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a11P31650 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.61□□□□□ -0.39
Slc6a11P31650 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.61□□□□□ -0.39
Slc6a11P31650 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.61□□□□□ -0.39
Slc6a11P31650 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.61□□□□□ -0.39
Slc6a11P31650 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms