Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.17■□□□□ 0.02
Vcam1P29533 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.17■□□□□ 0.02
Vcam1P29533 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.17■□□□□ 0.02
Vcam1P29533 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Vcam1P29533 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.17■□□□□ 0.02
Vcam1P29533 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vcam1P29533 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vcam1P29533 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vcam1P29533 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.16■□□□□ 0.02
Vcam1P29533 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.16■□□□□ 0.02
Vcam1P29533 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.16■□□□□ 0.02
Vcam1P29533 Gm14381-201ENSMUST00000122105 414 ntBASIC15.16■□□□□ 0.02
Vcam1P29533 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.16■□□□□ 0.02
Vcam1P29533 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.16■□□□□ 0.02
Vcam1P29533 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vcam1P29533 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.16■□□□□ 0.02
Vcam1P29533 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Vcam1P29533 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vcam1P29533 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vcam1P29533 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.15■□□□□ 0.02
Vcam1P29533 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.15■□□□□ 0.02
Vcam1P29533 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vcam1P29533 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vcam1P29533 Gm11222-201ENSMUST00000119005 738 ntBASIC15.15■□□□□ 0.02
Vcam1P29533 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.15■□□□□ 0.02
Vcam1P29533 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.15■□□□□ 0.02
Vcam1P29533 Gm8099-201ENSMUST00000200510 742 ntBASIC15.15■□□□□ 0.02
Vcam1P29533 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.15■□□□□ 0.02
Vcam1P29533 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.15■□□□□ 0.02
Vcam1P29533 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vcam1P29533 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Vcam1P29533 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.15■□□□□ 0.02
Vcam1P29533 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Vcam1P29533 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vcam1P29533 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Mir877-201ENSMUST00000104738 85 ntBASIC15.14■□□□□ 0.01
Vcam1P29533 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vcam1P29533 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vcam1P29533 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.14■□□□□ 0.01
Vcam1P29533 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms