Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm29199-201ENSMUST00000187766 775 ntBASIC14.86□□□□□ -0.03
Col2a1P28481 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.86□□□□□ -0.03
Col2a1P28481 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.86□□□□□ -0.03
Col2a1P28481 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Gm13097-201ENSMUST00000210722 397 ntBASIC14.86□□□□□ -0.03
Col2a1P28481 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.86□□□□□ -0.03
Col2a1P28481 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col2a1P28481 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.86□□□□□ -0.03
Col2a1P28481 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.86□□□□□ -0.03
Col2a1P28481 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col2a1P28481 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.85□□□□□ -0.03
Col2a1P28481 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col2a1P28481 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Gm13665-201ENSMUST00000120830 528 ntBASIC14.85□□□□□ -0.03
Col2a1P28481 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.85□□□□□ -0.03
Col2a1P28481 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.85□□□□□ -0.03
Col2a1P28481 Gm37201-201ENSMUST00000191845 523 ntBASIC14.85□□□□□ -0.03
Col2a1P28481 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.85□□□□□ -0.03
Col2a1P28481 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.85□□□□□ -0.03
Col2a1P28481 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col2a1P28481 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col2a1P28481 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.85□□□□□ -0.03
Col2a1P28481 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col2a1P28481 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Col2a1P28481 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.84□□□□□ -0.03
Col2a1P28481 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.84□□□□□ -0.03
Col2a1P28481 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col2a1P28481 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Gm44405-201ENSMUST00000198952 126 ntBASIC14.84□□□□□ -0.03
Col2a1P28481 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.84□□□□□ -0.03
Col2a1P28481 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.84□□□□□ -0.03
Col2a1P28481 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.84□□□□□ -0.03
Col2a1P28481 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col2a1P28481 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.84□□□□□ -0.03
Col2a1P28481 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.84□□□□□ -0.03
Col2a1P28481 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col2a1P28481 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.84□□□□□ -0.03
Col2a1P28481 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col2a1P28481 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col2a1P28481 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col2a1P28481 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col2a1P28481 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Col2a1P28481 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.83□□□□□ -0.03
Col2a1P28481 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Col2a1P28481 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.83□□□□□ -0.03
Col2a1P28481 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms