Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nfkb1P25799 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.64□□□□□ -0.23
Nfkb1P25799 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Nfkb1P25799 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nfkb1P25799 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Gm13123-201ENSMUST00000122173 492 ntBASIC13.64□□□□□ -0.23
Nfkb1P25799 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.64□□□□□ -0.23
Nfkb1P25799 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nfkb1P25799 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.64□□□□□ -0.23
Nfkb1P25799 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.64□□□□□ -0.23
Nfkb1P25799 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nfkb1P25799 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nfkb1P25799 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.63□□□□□ -0.23
Nfkb1P25799 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.63□□□□□ -0.23
Nfkb1P25799 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.63□□□□□ -0.23
Nfkb1P25799 Gm16202-201ENSMUST00000117532 544 ntBASIC13.63□□□□□ -0.23
Nfkb1P25799 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.63□□□□□ -0.23
Nfkb1P25799 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nfkb1P25799 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.63□□□□□ -0.23
Nfkb1P25799 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.63□□□□□ -0.23
Nfkb1P25799 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.63□□□□□ -0.23
Nfkb1P25799 Gm44069-201ENSMUST00000204898 506 ntBASIC13.63□□□□□ -0.23
Nfkb1P25799 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.63□□□□□ -0.23
Nfkb1P25799 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Gm10268-201ENSMUST00000085340 555 ntBASIC13.63□□□□□ -0.23
Nfkb1P25799 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nfkb1P25799 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nfkb1P25799 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.63□□□□□ -0.23
Nfkb1P25799 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nfkb1P25799 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nfkb1P25799 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Nfkb1P25799 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.62□□□□□ -0.23
Nfkb1P25799 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.62□□□□□ -0.23
Nfkb1P25799 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.62□□□□□ -0.23
Nfkb1P25799 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.62□□□□□ -0.23
Nfkb1P25799 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Gm7029-201ENSMUST00000173226 450 ntBASIC13.62□□□□□ -0.23
Nfkb1P25799 Gm18054-201ENSMUST00000207539 555 ntBASIC13.62□□□□□ -0.23
Nfkb1P25799 Gm45880-201ENSMUST00000213041 853 ntBASIC13.62□□□□□ -0.23
Nfkb1P25799 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.62□□□□□ -0.23
Nfkb1P25799 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Nfkb1P25799 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.62□□□□□ -0.23
Nfkb1P25799 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nfkb1P25799 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nfkb1P25799 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.61□□□□□ -0.23
Nfkb1P25799 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nfkb1P25799 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nfkb1P25799 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms