Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.76□□□□□ -0.37
BdnfP21237 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.76□□□□□ -0.37
BdnfP21237 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.76□□□□□ -0.37
BdnfP21237 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Gm10766-202ENSMUST00000194123 606 ntBASIC12.76□□□□□ -0.37
BdnfP21237 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.76□□□□□ -0.37
BdnfP21237 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BdnfP21237 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.76□□□□□ -0.37
BdnfP21237 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
BdnfP21237 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BdnfP21237 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.76□□□□□ -0.37
BdnfP21237 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
BdnfP21237 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
BdnfP21237 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.75□□□□□ -0.37
BdnfP21237 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
BdnfP21237 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.75□□□□□ -0.37
BdnfP21237 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.75□□□□□ -0.37
BdnfP21237 Gm12585-201ENSMUST00000117307 290 ntBASIC12.75□□□□□ -0.37
BdnfP21237 Gm14767-201ENSMUST00000121559 586 ntBASIC12.75□□□□□ -0.37
BdnfP21237 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.75□□□□□ -0.37
BdnfP21237 Gm3436-201ENSMUST00000179930 840 ntBASIC12.75□□□□□ -0.37
BdnfP21237 Gm4804-201ENSMUST00000182234 999 ntBASIC12.75□□□□□ -0.37
BdnfP21237 Gm27321-201ENSMUST00000185021 205 ntBASIC12.75□□□□□ -0.37
BdnfP21237 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.75□□□□□ -0.37
BdnfP21237 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.75□□□□□ -0.37
BdnfP21237 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.75□□□□□ -0.37
BdnfP21237 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BdnfP21237 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.74□□□□□ -0.37
BdnfP21237 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.74□□□□□ -0.37
BdnfP21237 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.74□□□□□ -0.37
BdnfP21237 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
BdnfP21237 Gm27680-201ENSMUST00000184192 160 ntBASIC12.74□□□□□ -0.37
BdnfP21237 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.74□□□□□ -0.37
BdnfP21237 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
BdnfP21237 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms