Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gm8312-201ENSMUST00000119380 618 ntBASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gm27486-201ENSMUST00000184923 80 ntBASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gm45784-201ENSMUST00000188360 142 ntBASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gm17795-201ENSMUST00000214505 757 ntBASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gm17794-201ENSMUST00000220252 955 ntBASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 BC001981-202ENSMUST00000191393 1545 ntBASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tnfrsf9P20334 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Gm14542-201ENSMUST00000118460 1248 ntBASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Gm20614-201ENSMUST00000177106 632 ntBASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Gm9726-201ENSMUST00000180321 678 ntBASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Gm43179-201ENSMUST00000198797 275 ntBASIC10.98□□□□□ -0.65
Tnfrsf9P20334 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Gm9257-201ENSMUST00000221254 232 ntBASIC10.98□□□□□ -0.65
Tnfrsf9P20334 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Tnfrsf9P20334 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms