Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm6218-201ENSMUST00000219812 628 ntBASIC12.67□□□□□ -0.38
Lire1P11260 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Lire1P11260 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Lire1P11260 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lire1P11260 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lire1P11260 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.67□□□□□ -0.38
Lire1P11260 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lire1P11260 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Lire1P11260 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lire1P11260 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
Lire1P11260 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.66□□□□□ -0.38
Lire1P11260 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Gm22189-201ENSMUST00000103822 86 ntBASIC12.66□□□□□ -0.38
Lire1P11260 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Lire1P11260 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.66□□□□□ -0.38
Lire1P11260 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Gm6222-201ENSMUST00000120787 396 ntBASIC12.66□□□□□ -0.38
Lire1P11260 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lire1P11260 Mir1897-201ENSMUST00000122581 272 ntBASIC12.66□□□□□ -0.38
Lire1P11260 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.66□□□□□ -0.38
Lire1P11260 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.66□□□□□ -0.38
Lire1P11260 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.66□□□□□ -0.38
Lire1P11260 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Gm15823-201ENSMUST00000064305 670 ntBASIC12.66□□□□□ -0.38
Lire1P11260 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.66□□□□□ -0.38
Lire1P11260 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.66□□□□□ -0.38
Lire1P11260 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.66□□□□□ -0.38
Lire1P11260 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lire1P11260 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.65□□□□□ -0.38
Lire1P11260 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.65□□□□□ -0.38
Lire1P11260 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.65□□□□□ -0.38
Lire1P11260 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.65□□□□□ -0.38
Lire1P11260 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.65□□□□□ -0.38
Lire1P11260 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.65□□□□□ -0.38
Lire1P11260 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Lire1P11260 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.65□□□□□ -0.38
Lire1P11260 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Lire1P11260 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Lire1P11260 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.65□□□□□ -0.38
Lire1P11260 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.65□□□□□ -0.38
Lire1P11260 Gm43703-201ENSMUST00000200523 763 ntBASIC12.65□□□□□ -0.38
Lire1P11260 Gm45384-201ENSMUST00000210451 277 ntBASIC12.65□□□□□ -0.38
Lire1P11260 Dupd1-202ENSMUST00000224735 548 ntBASIC12.65□□□□□ -0.38
Lire1P11260 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.65□□□□□ -0.38
Lire1P11260 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.65□□□□□ -0.38
Lire1P11260 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lire1P11260 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Lire1P11260 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lire1P11260 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lire1P11260 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lire1P11260 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lire1P11260 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lire1P11260 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms