Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl1P10146 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Ccl1P10146 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl1P10146 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl1P10146 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl1P10146 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl1P10146 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl1P10146 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl1P10146 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl1P10146 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl1P10146 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ccl1P10146 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Ccl1P10146 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.27□□□□□ -0.77
Ccl1P10146 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Ccl1P10146 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ccl1P10146 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.27□□□□□ -0.77
Ccl1P10146 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.27□□□□□ -0.77
Ccl1P10146 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ccl1P10146 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.27□□□□□ -0.77
Ccl1P10146 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl1P10146 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Rubie-203ENSMUST00000227803 2430 ntBASIC10.26□□□□□ -0.77
Ccl1P10146 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccl1P10146 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Ccl1P10146 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccl1P10146 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ccl1P10146 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.26□□□□□ -0.77
Ccl1P10146 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Ccl1P10146 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Ccl1P10146 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.26□□□□□ -0.77
Ccl1P10146 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Ank2-226ENSMUST00000189368 339 ntBASIC10.26□□□□□ -0.77
Ccl1P10146 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.26□□□□□ -0.77
Ccl1P10146 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.26□□□□□ -0.77
Ccl1P10146 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.26□□□□□ -0.77
Ccl1P10146 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.26□□□□□ -0.77
Ccl1P10146 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.26□□□□□ -0.77
Ccl1P10146 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Ccl1P10146 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Ccl1P10146 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Ccl1P10146 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Ccl1P10146 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Ccl1P10146 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.26□□□□□ -0.77
Ccl1P10146 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Ccl1P10146 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl1P10146 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Ccl1P10146 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms