Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxc9P09633 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.08■□□□□ 0.32
Hoxc9P09633 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hoxc9P09633 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC17.08■□□□□ 0.32
Hoxc9P09633 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.08■□□□□ 0.32
Hoxc9P09633 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Gm38317-201ENSMUST00000195564 343 ntBASIC17.08■□□□□ 0.32
Hoxc9P09633 Gm5869-201ENSMUST00000200248 1257 ntBASIC17.08■□□□□ 0.32
Hoxc9P09633 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.08■□□□□ 0.32
Hoxc9P09633 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.08■□□□□ 0.32
Hoxc9P09633 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Hoxc9P09633 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxc9P09633 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Hoxc9P09633 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gm10782-202ENSMUST00000223775 1480 ntBASIC17.07■□□□□ 0.32
Hoxc9P09633 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.07■□□□□ 0.32
Hoxc9P09633 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gm5597-201ENSMUST00000182353 1193 ntBASIC17.07■□□□□ 0.32
Hoxc9P09633 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.07■□□□□ 0.32
Hoxc9P09633 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.07■□□□□ 0.32
Hoxc9P09633 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Gm37737-201ENSMUST00000195013 1638 ntBASIC17.07■□□□□ 0.32
Hoxc9P09633 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxc9P09633 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc9P09633 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC17.06■□□□□ 0.32
Hoxc9P09633 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC17.06■□□□□ 0.32
Hoxc9P09633 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc9P09633 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hoxc9P09633 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC17.06■□□□□ 0.32
Hoxc9P09633 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC17.06■□□□□ 0.32
Hoxc9P09633 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc9P09633 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC17.06■□□□□ 0.32
Hoxc9P09633 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.06■□□□□ 0.32
Hoxc9P09633 Gm44967-201ENSMUST00000207047 631 ntBASIC17.06■□□□□ 0.32
Hoxc9P09633 Gm5904-201ENSMUST00000210286 865 ntBASIC17.06■□□□□ 0.32
Hoxc9P09633 Gm13097-201ENSMUST00000210722 397 ntBASIC17.06■□□□□ 0.32
Hoxc9P09633 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC17.06■□□□□ 0.32
Hoxc9P09633 Gm22058-201ENSMUST00000083393 310 ntBASIC17.06■□□□□ 0.32
Hoxc9P09633 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc9P09633 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc9P09633 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hoxc9P09633 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxc9P09633 Gm37827-201ENSMUST00000194486 1542 ntBASIC17.06■□□□□ 0.32
Hoxc9P09633 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hoxc9P09633 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hoxc9P09633 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxc9P09633 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms