Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hoxd3P09027 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Hoxd3P09027 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Hoxd3P09027 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.43□□□□□ -0.74
Hoxd3P09027 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.43□□□□□ -0.74
Hoxd3P09027 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Hoxd3P09027 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Hoxd3P09027 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Hoxd3P09027 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hoxd3P09027 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Gm14539-201ENSMUST00000117527 174 ntBASIC10.42□□□□□ -0.74
Hoxd3P09027 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Gm29608-201ENSMUST00000190444 463 ntBASIC10.42□□□□□ -0.74
Hoxd3P09027 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.42□□□□□ -0.74
Hoxd3P09027 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxd3P09027 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm13612-201ENSMUST00000119276 390 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm6152-201ENSMUST00000151704 340 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm8652-201ENSMUST00000181363 964 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm37073-201ENSMUST00000192469 1222 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.41□□□□□ -0.74
Hoxd3P09027 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm20239-201ENSMUST00000196610 982 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxd3P09027 Gm6312-201ENSMUST00000204060 1194 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 AC173345.3-201ENSMUST00000221245 1093 ntBASIC10.41□□□□□ -0.74
Hoxd3P09027 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms