Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.64■□□□□ 0.09
Col3a1P08121 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.64■□□□□ 0.09
Col3a1P08121 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.64■□□□□ 0.09
Col3a1P08121 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.64■□□□□ 0.09
Col3a1P08121 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.64■□□□□ 0.09
Col3a1P08121 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.64■□□□□ 0.09
Col3a1P08121 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Col3a1P08121 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Col3a1P08121 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Gm13736-201ENSMUST00000119272 253 ntBASIC15.64■□□□□ 0.09
Col3a1P08121 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.64■□□□□ 0.09
Col3a1P08121 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.64■□□□□ 0.09
Col3a1P08121 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.64■□□□□ 0.09
Col3a1P08121 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Col3a1P08121 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Col3a1P08121 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col3a1P08121 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col3a1P08121 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.63■□□□□ 0.09
Col3a1P08121 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col3a1P08121 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col3a1P08121 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Col3a1P08121 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.63■□□□□ 0.09
Col3a1P08121 Gm2546-201ENSMUST00000182630 991 ntBASIC15.63■□□□□ 0.09
Col3a1P08121 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.63■□□□□ 0.09
Col3a1P08121 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.63■□□□□ 0.09
Col3a1P08121 Gm8885-201ENSMUST00000189382 598 ntBASIC15.63■□□□□ 0.09
Col3a1P08121 Gm5950-201ENSMUST00000213337 772 ntBASIC15.63■□□□□ 0.09
Col3a1P08121 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.63■□□□□ 0.09
Col3a1P08121 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.63■□□□□ 0.09
Col3a1P08121 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.63■□□□□ 0.09
Col3a1P08121 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.63■□□□□ 0.09
Col3a1P08121 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.63■□□□□ 0.09
Col3a1P08121 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col3a1P08121 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.62■□□□□ 0.09
Col3a1P08121 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.62■□□□□ 0.09
Col3a1P08121 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.62■□□□□ 0.09
Col3a1P08121 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.62■□□□□ 0.09
Col3a1P08121 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.62■□□□□ 0.09
Col3a1P08121 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.62■□□□□ 0.09
Col3a1P08121 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.62■□□□□ 0.09
Col3a1P08121 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Col3a1P08121 Gm25668-201ENSMUST00000157700 129 ntBASIC15.62■□□□□ 0.09
Col3a1P08121 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.62■□□□□ 0.09
Col3a1P08121 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.62■□□□□ 0.09
Col3a1P08121 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Col3a1P08121 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.62■□□□□ 0.09
Col3a1P08121 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.62■□□□□ 0.09
Col3a1P08121 Gm6082-201ENSMUST00000215204 454 ntBASIC15.62■□□□□ 0.09
Col3a1P08121 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.62■□□□□ 0.09
Col3a1P08121 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Gm22058-201ENSMUST00000083393 310 ntBASIC15.62■□□□□ 0.09
Col3a1P08121 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Col3a1P08121 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col3a1P08121 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.62■□□□□ 0.09
Col3a1P08121 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms