Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Gm18054-201ENSMUST00000207539 555 ntBASIC14.06□□□□□ -0.16
TnfP06804 Gm45331-201ENSMUST00000209868 554 ntBASIC14.06□□□□□ -0.16
TnfP06804 Gm6458-201ENSMUST00000211573 635 ntBASIC14.06□□□□□ -0.16
TnfP06804 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.06□□□□□ -0.16
TnfP06804 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.06□□□□□ -0.16
TnfP06804 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.06□□□□□ -0.16
TnfP06804 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.06□□□□□ -0.16
TnfP06804 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TnfP06804 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TnfP06804 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.05□□□□□ -0.16
TnfP06804 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Gm22018-201ENSMUST00000104357 131 ntBASIC14.05□□□□□ -0.16
TnfP06804 Gm11637-201ENSMUST00000120601 592 ntBASIC14.05□□□□□ -0.16
TnfP06804 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.05□□□□□ -0.16
TnfP06804 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.05□□□□□ -0.16
TnfP06804 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Gm25261-201ENSMUST00000157416 134 ntBASIC14.05□□□□□ -0.16
TnfP06804 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Gm25927-201ENSMUST00000175058 117 ntBASIC14.05□□□□□ -0.16
TnfP06804 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.05□□□□□ -0.16
TnfP06804 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.05□□□□□ -0.16
TnfP06804 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.05□□□□□ -0.16
TnfP06804 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.05□□□□□ -0.16
TnfP06804 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnfP06804 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TnfP06804 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TnfP06804 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.04□□□□□ -0.16
TnfP06804 Gm11978-201ENSMUST00000122315 466 ntBASIC14.04□□□□□ -0.16
TnfP06804 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.04□□□□□ -0.16
TnfP06804 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.04□□□□□ -0.16
TnfP06804 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.04□□□□□ -0.16
TnfP06804 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.04□□□□□ -0.16
TnfP06804 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.04□□□□□ -0.16
TnfP06804 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.04□□□□□ -0.16
TnfP06804 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.04□□□□□ -0.16
TnfP06804 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.04□□□□□ -0.16
TnfP06804 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.04□□□□□ -0.16
TnfP06804 Gm7399-201ENSMUST00000032395 858 ntBASIC14.04□□□□□ -0.16
TnfP06804 Gm9823-201ENSMUST00000051212 327 ntBASIC14.04□□□□□ -0.16
TnfP06804 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.04□□□□□ -0.16
TnfP06804 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TnfP06804 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TnfP06804 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnfP06804 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
TnfP06804 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnfP06804 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms