Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 Gm12403-201ENSMUST00000121384 959 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
H3f3cP02301 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
H3f3cP02301 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 Gm38223-201ENSMUST00000194484 695 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 Gm8515-201ENSMUST00000194852 576 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
H3f3cP02301 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.42□□□□□ -0.58
H3f3cP02301 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.42□□□□□ -0.58
H3f3cP02301 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
H3f3cP02301 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.42□□□□□ -0.58
H3f3cP02301 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
H3f3cP02301 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
H3f3cP02301 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
H3f3cP02301 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.41□□□□□ -0.58
H3f3cP02301 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
H3f3cP02301 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
H3f3cP02301 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.41□□□□□ -0.58
H3f3cP02301 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
H3f3cP02301 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.41□□□□□ -0.58
H3f3cP02301 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.41□□□□□ -0.58
H3f3cP02301 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
H3f3cP02301 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
H3f3cP02301 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.41□□□□□ -0.58
H3f3cP02301 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
H3f3cP02301 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.41□□□□□ -0.58
H3f3cP02301 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.41□□□□□ -0.58
H3f3cP02301 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.41□□□□□ -0.58
H3f3cP02301 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Gm6180-201ENSMUST00000065243 498 ntBASIC11.41□□□□□ -0.58
H3f3cP02301 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
H3f3cP02301 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.41□□□□□ -0.58
H3f3cP02301 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
H3f3cP02301 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
H3f3cP02301 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
H3f3cP02301 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
H3f3cP02301 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
H3f3cP02301 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
H3f3cP02301 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
H3f3cP02301 Gm15371-201ENSMUST00000117057 784 ntBASIC11.4□□□□□ -0.58
H3f3cP02301 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.4□□□□□ -0.58
H3f3cP02301 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
H3f3cP02301 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.4□□□□□ -0.58
H3f3cP02301 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms