Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.49□□□□□ -0.73
P01788 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.49□□□□□ -0.73
P01788 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.49□□□□□ -0.73
P01788 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
P01788 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.49□□□□□ -0.73
P01788 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
P01788 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
P01788 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
P01788 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P01788 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P01788 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.48□□□□□ -0.73
P01788 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P01788 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.48□□□□□ -0.73
P01788 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.48□□□□□ -0.73
P01788 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
P01788 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
P01788 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.48□□□□□ -0.73
P01788 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.48□□□□□ -0.73
P01788 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
P01788 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.48□□□□□ -0.73
P01788 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.48□□□□□ -0.73
P01788 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.48□□□□□ -0.73
P01788 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Gm25948-201ENSMUST00000175334 112 ntBASIC10.48□□□□□ -0.73
P01788 Gm43703-201ENSMUST00000200523 763 ntBASIC10.48□□□□□ -0.73
P01788 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.48□□□□□ -0.73
P01788 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.48□□□□□ -0.73
P01788 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.48□□□□□ -0.73
P01788 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
P01788 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.48□□□□□ -0.73
P01788 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.48□□□□□ -0.73
P01788 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.48□□□□□ -0.73
P01788 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P01788 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.47□□□□□ -0.73
P01788 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.47□□□□□ -0.73
P01788 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
P01788 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
P01788 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.47□□□□□ -0.73
P01788 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
P01788 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.47□□□□□ -0.73
P01788 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.47□□□□□ -0.73
P01788 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.47□□□□□ -0.73
P01788 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P01788 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms