Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.74□□□□□ -0.37
Hcn1O88704 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.74□□□□□ -0.37
Hcn1O88704 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.74□□□□□ -0.37
Hcn1O88704 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Gm24420-201ENSMUST00000176676 59 ntBASIC12.74□□□□□ -0.37
Hcn1O88704 Gm5354-201ENSMUST00000182417 973 ntBASIC12.74□□□□□ -0.37
Hcn1O88704 Gm37917-201ENSMUST00000194711 392 ntBASIC12.74□□□□□ -0.37
Hcn1O88704 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.74□□□□□ -0.37
Hcn1O88704 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hcn1O88704 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.74□□□□□ -0.37
Hcn1O88704 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.74□□□□□ -0.37
Hcn1O88704 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hcn1O88704 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hcn1O88704 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hcn1O88704 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.73□□□□□ -0.37
Hcn1O88704 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Mir698-201ENSMUST00000102164 109 ntBASIC12.73□□□□□ -0.37
Hcn1O88704 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.73□□□□□ -0.37
Hcn1O88704 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Hcn1O88704 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hcn1O88704 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Hcn1O88704 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Hcn1O88704 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.72□□□□□ -0.37
Hcn1O88704 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hcn1O88704 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Gm2445-201ENSMUST00000182798 989 ntBASIC12.72□□□□□ -0.37
Hcn1O88704 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.72□□□□□ -0.37
Hcn1O88704 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.72□□□□□ -0.37
Hcn1O88704 Gm18624-201ENSMUST00000220966 658 ntBASIC12.72□□□□□ -0.37
Hcn1O88704 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Gm15823-201ENSMUST00000064305 670 ntBASIC12.72□□□□□ -0.37
Hcn1O88704 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hcn1O88704 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hcn1O88704 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms