Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cops4O88544 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Gm22065-201ENSMUST00000103753 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm22066-201ENSMUST00000103761 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm24932-201ENSMUST00000103763 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm24115-201ENSMUST00000103799 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm22190-201ENSMUST00000103827 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm22191-201ENSMUST00000103831 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm24721-201ENSMUST00000103849 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm28018-201ENSMUST00000103869 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm26399-201ENSMUST00000103937 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Cops4O88544 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.25□□□□□ -0.45
Cops4O88544 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.25□□□□□ -0.45
Cops4O88544 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.25□□□□□ -0.45
Cops4O88544 Gm25349-201ENSMUST00000177728 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm23616-201ENSMUST00000177797 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm25871-201ENSMUST00000177816 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm24752-201ENSMUST00000178240 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm24496-201ENSMUST00000178287 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm25649-201ENSMUST00000178476 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm25548-201ENSMUST00000178681 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm23147-201ENSMUST00000178841 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm26095-201ENSMUST00000179270 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm22171-201ENSMUST00000179283 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm23936-201ENSMUST00000179354 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm22619-201ENSMUST00000179516 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm25255-201ENSMUST00000179579 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm24755-201ENSMUST00000179691 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm26506-201ENSMUST00000179692 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm25086-201ENSMUST00000179931 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm23243-201ENSMUST00000180047 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm24659-201ENSMUST00000180212 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm24169-201ENSMUST00000180244 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm23689-201ENSMUST00000180354 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm27359-201ENSMUST00000184153 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm27785-201ENSMUST00000184268 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm27466-201ENSMUST00000184396 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Gm27703-201ENSMUST00000184836 110 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Gm2756-201ENSMUST00000195851 400 ntBASIC12.25□□□□□ -0.45
Cops4O88544 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.25□□□□□ -0.45
Cops4O88544 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cops4O88544 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cops4O88544 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cops4O88544 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cops4O88544 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.25□□□□□ -0.45
Cops4O88544 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.24□□□□□ -0.45
Cops4O88544 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cops4O88544 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Gm5566-201ENSMUST00000116118 459 ntBASIC12.24□□□□□ -0.45
Cops4O88544 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.24□□□□□ -0.45
Cops4O88544 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.24□□□□□ -0.45
Cops4O88544 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.24□□□□□ -0.45
Cops4O88544 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.24□□□□□ -0.45
Cops4O88544 Gm10253-201ENSMUST00000194270 940 ntBASIC12.24□□□□□ -0.45
Cops4O88544 Gm7774-201ENSMUST00000200064 533 ntBASIC12.24□□□□□ -0.45
Cops4O88544 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cops4O88544 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms