Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.4□□□□□ -0.26
Chrna4O70174 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chrna4O70174 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.4□□□□□ -0.26
Chrna4O70174 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.4□□□□□ -0.26
Chrna4O70174 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.4□□□□□ -0.26
Chrna4O70174 Gm27701-201ENSMUST00000184498 110 ntBASIC13.4□□□□□ -0.26
Chrna4O70174 Gm8515-201ENSMUST00000194852 576 ntBASIC13.4□□□□□ -0.26
Chrna4O70174 Gm6745-201ENSMUST00000199216 526 ntBASIC13.4□□□□□ -0.26
Chrna4O70174 Gm45384-201ENSMUST00000210451 277 ntBASIC13.4□□□□□ -0.26
Chrna4O70174 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.4□□□□□ -0.26
Chrna4O70174 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.4□□□□□ -0.26
Chrna4O70174 Gm18041-201ENSMUST00000218210 618 ntBASIC13.4□□□□□ -0.26
Chrna4O70174 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chrna4O70174 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chrna4O70174 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.4□□□□□ -0.26
Chrna4O70174 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.4□□□□□ -0.26
Chrna4O70174 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chrna4O70174 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chrna4O70174 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chrna4O70174 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Chrna4O70174 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Chrna4O70174 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.39□□□□□ -0.27
Chrna4O70174 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.39□□□□□ -0.27
Chrna4O70174 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.39□□□□□ -0.27
Chrna4O70174 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.39□□□□□ -0.27
Chrna4O70174 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.39□□□□□ -0.27
Chrna4O70174 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.39□□□□□ -0.27
Chrna4O70174 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Chrna4O70174 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Gm28911-201ENSMUST00000188837 117 ntBASIC13.39□□□□□ -0.27
Chrna4O70174 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.39□□□□□ -0.27
Chrna4O70174 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Chrna4O70174 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Chrna4O70174 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Chrna4O70174 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chrna4O70174 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chrna4O70174 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Chrna4O70174 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.39□□□□□ -0.27
Chrna4O70174 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.38□□□□□ -0.27
Chrna4O70174 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Chrna4O70174 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Chrna4O70174 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 Gm12928-201ENSMUST00000117115 573 ntBASIC13.38□□□□□ -0.27
Chrna4O70174 Gm12138-201ENSMUST00000122180 951 ntBASIC13.38□□□□□ -0.27
Chrna4O70174 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.38□□□□□ -0.27
Chrna4O70174 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Chrna4O70174 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.38□□□□□ -0.27
Chrna4O70174 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Chrna4O70174 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.38□□□□□ -0.27
Chrna4O70174 Gm8463-201ENSMUST00000208573 613 ntBASIC13.38□□□□□ -0.27
Chrna4O70174 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.38□□□□□ -0.27
Chrna4O70174 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.38□□□□□ -0.27
Chrna4O70174 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna4O70174 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms