Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.28□□□□□ -0.12
Nr1i3O35627 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nr1i3O35627 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.28□□□□□ -0.12
Nr1i3O35627 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nr1i3O35627 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nr1i3O35627 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nr1i3O35627 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nr1i3O35627 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.27□□□□□ -0.12
Nr1i3O35627 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Nr1i3O35627 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nr1i3O35627 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.27□□□□□ -0.13
Nr1i3O35627 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.27□□□□□ -0.13
Nr1i3O35627 Gm12151-201ENSMUST00000121374 290 ntBASIC14.27□□□□□ -0.13
Nr1i3O35627 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.27□□□□□ -0.13
Nr1i3O35627 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.27□□□□□ -0.13
Nr1i3O35627 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Gm38223-201ENSMUST00000194484 695 ntBASIC14.27□□□□□ -0.13
Nr1i3O35627 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.27□□□□□ -0.13
Nr1i3O35627 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.27□□□□□ -0.13
Nr1i3O35627 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nr1i3O35627 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Nr1i3O35627 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Nr1i3O35627 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.26□□□□□ -0.13
Nr1i3O35627 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Syt7-204ENSMUST00000223586 1344 ntBASIC14.26□□□□□ -0.13
Nr1i3O35627 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.26□□□□□ -0.13
Nr1i3O35627 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nr1i3O35627 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.26□□□□□ -0.13
Nr1i3O35627 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.26□□□□□ -0.13
Nr1i3O35627 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Nr1i3O35627 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.26□□□□□ -0.13
Nr1i3O35627 Gm26315-201ENSMUST00000083890 321 ntBASIC14.26□□□□□ -0.13
Nr1i3O35627 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nr1i3O35627 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Nr1i3O35627 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.25□□□□□ -0.13
Nr1i3O35627 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nr1i3O35627 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms