Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.29□□□□□ -0.12
Usp35M0QWN7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.29□□□□□ -0.12
Usp35M0QWN7 Gm8652-201ENSMUST00000181363 964 ntBASIC14.29□□□□□ -0.12
Usp35M0QWN7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp35M0QWN7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gm13226-201ENSMUST00000117838 404 ntBASIC14.28□□□□□ -0.12
Usp35M0QWN7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gm27847-201ENSMUST00000183711 107 ntBASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gm27375-201ENSMUST00000183799 107 ntBASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gm38223-201ENSMUST00000194484 695 ntBASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gm44397-201ENSMUST00000195950 113 ntBASIC14.28□□□□□ -0.12
Usp35M0QWN7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp35M0QWN7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gm45841-201ENSMUST00000207700 164 ntBASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.28□□□□□ -0.12
Usp35M0QWN7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.28□□□□□ -0.12
Usp35M0QWN7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp35M0QWN7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp35M0QWN7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Usp35M0QWN7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp35M0QWN7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.27□□□□□ -0.12
Usp35M0QWN7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp35M0QWN7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Usp35M0QWN7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Gm45784-201ENSMUST00000188360 142 ntBASIC14.27□□□□□ -0.13
Usp35M0QWN7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Gm7561-201ENSMUST00000211203 886 ntBASIC14.27□□□□□ -0.13
Usp35M0QWN7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp35M0QWN7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms