Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Gm11930-201ENSMUST00000117788 190 ntBASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Mir5132-201ENSMUST00000175166 71 ntBASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Gm8913-201ENSMUST00000209491 641 ntBASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc180J3QNE4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Gm28386-201ENSMUST00000189147 1849 ntBASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Mir6979-201ENSMUST00000183927 56 ntBASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Mir339-201ENSMUST00000083659 96 ntBASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
Ccdc180J3QNE4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 B9d1os-201ENSMUST00000137010 674 ntBASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Gm24749-201ENSMUST00000157838 343 ntBASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc180J3QNE4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Gm4864-201ENSMUST00000219894 1461 ntBASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Gm19208-201ENSMUST00000213861 912 ntBASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Gm29787-201ENSMUST00000222129 849 ntBASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 AC167013.1-201ENSMUST00000228592 202 ntBASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ccdc180J3QNE4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Gm14921-201ENSMUST00000118643 908 ntBASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Rprl1-202ENSMUST00000198476 238 ntBASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Gm43134-201ENSMUST00000199434 1886 ntBASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc180J3QNE4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms